Package: SMUT 1.3
SMUT: Multi-SNP Mediation Intersection-Union Test
Testing the mediation effect of multiple SNPs on an outcome through a mediator.
Authors:
SMUT_1.3.tar.gz
SMUT_1.3.zip(r-4.5)SMUT_1.3.zip(r-4.4)SMUT_1.3.zip(r-4.3)
SMUT_1.3.tgz(r-4.4-x86_64)SMUT_1.3.tgz(r-4.4-arm64)SMUT_1.3.tgz(r-4.3-x86_64)SMUT_1.3.tgz(r-4.3-arm64)
SMUT_1.3.tar.gz(r-4.5-noble)SMUT_1.3.tar.gz(r-4.4-noble)
SMUT_1.3.tgz(r-4.4-emscripten)SMUT_1.3.tgz(r-4.3-emscripten)
SMUT.pdf |SMUT.html✨
SMUT/json (API)
# Install 'SMUT' in R: |
install.packages('SMUT', repos = c('https://wjzhong.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/wjzhong/smut/issues
Datasets:
- Genotype_data - Example genotype data for SMUT
Last updated 4 years agofrom:492c1c6553. Checks:OK: 9. Indexed: yes.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Oct 08 2024 |
R-4.5-win-x86_64 | OK | Oct 08 2024 |
R-4.5-linux-x86_64 | OK | Oct 08 2024 |
R-4.4-win-x86_64 | OK | Oct 08 2024 |
R-4.4-mac-x86_64 | OK | Oct 08 2024 |
R-4.4-mac-aarch64 | OK | Oct 08 2024 |
R-4.3-win-x86_64 | OK | Oct 08 2024 |
R-4.3-mac-x86_64 | OK | Oct 08 2024 |
R-4.3-mac-aarch64 | OK | Oct 08 2024 |
Exports:eigenMapMatMultGeneralized_Testing_coefficient_of_mediatorGSMUTSMUTTesting_coefficient_of_mediator
Dependencies:latticeMASSMatrixRcppRcppEigenRSpectraSKATSPAtest
Readme and manuals
Help Manual
Help page | Topics |
---|---|
Matrix multiplication using RcppEigen | eigenMapMatMult |
Testing coefficient of mediator in the outcome model for an outcome following an exponential family distribution or a survival outcome | Generalized_Testing_coefficient_of_mediator |
Example genotype data for SMUT | Genotype_data |
Generalized Multi-SNP Mediation Intersection-Union Test | GSMUT |
Multi-SNP Mediation Intersection-Union Test | SMUT |
Testing coefficient of mediator in the outcome model | Testing_coefficient_of_mediator |